Scaffold Ga0131077_10056411

Overview

Basic Information

• Taxon OID: 3300009873
• Scaffold ID: Ga0131077_10056411
• Source Dataset Name: Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Novogene Bioinformatics Technology Co., Ltd
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5371
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 6 (75.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community Analysis In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location

• Location Name: Tai Wan
• Coordinates
  • Lat. (^o): 24.0
  • Long. (^o): 120.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F035236	Metagenome	172	Y
F059117	Metagenome	134	Y
F101098	Metagenome / Metatranscriptome	102	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0131077_100564111	F101098	N/A	PFMAGFVGLNAIAIYLMKMVMQVSYAWLISFYWMLTPLVAPMVILPQTRGVFLGWLKTYVAVALWPMFFAFAERLALAIPWSAWLGEFDGAVGSWEMATNWFQGELMLLVFNITFFFVYLSIPIASYLIVSGASRPFRNF*
Ga0131077_100564115	F059117	AGGTGG	LSAADSRFVAIWASHEARARLWFRLFLLASAGMALSLVTTIRVWSRPREVIRIGCDGIPQVVRLDNTAYSEPNEREIRAFATQFAVFYARSDSYSILNDLVWCANRMAPELRERFKRAVRGTPEAPGVITVIEKLKRRTQIDPAALEIHVDKGPYPWKVQLKGVRQVVGEEGPGETFELEMSLVRASREEQLEGLLVWGIRAKGEPIDTVLAAVSAEGGRLP*
Ga0131077_100564117	F035236	AGG	MNLLLGLPFIIVVWGLLLPLLFLDGAEAYLKFLWENPVLVAVVTTNLAVPSYWLARRLSQALLLRGTGAKLRATHEPP*