Scaffold Ga0131077

Basic Information
Taxon OID	3300009873 Open in IMG/M
Scaffold ID	Ga0131077_10042182 Open in IMG/M
Source Dataset Name	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Beijing Novogene Bioinformatics Technology Co., Ltd
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300009873 Open in IMG/M

Scaffold ID

Ga0131077_10042182 Open in IMG/M

Source Dataset Name

Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

Beijing Novogene Bioinformatics Technology Co., Ltd

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	6658
Total Scaffold Genes	10 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	8 (80.00%)
Novel Protein Genes	4 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	3 (75.00%)
Associated Families	4

Scaffold Components

Scaffold Length (bps)

6658

Total Scaffold Genes

10 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

8 (80.00%)

Novel Protein Genes

4 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

3 (75.00%)

Associated Families

Taxonomy
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	(Source: UniRef50)

Taxonomy

All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium

(Source: UniRef50)

Source Dataset Ecosystem
Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community Analysis In Wastewater Treatment Plant From Tai Wan

Source Dataset Ecosystem

Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community Analysis In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location
Location Name	Tai Wan
Coordinates	Lat. (^o)	24.0	Long. (^o)	120.0	Alt. (m)	Depth (m)
Location on Map

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Source Dataset Sampling Location

Location Name

Tai Wan

Coordinates

Lat. (^o)

24.0

Long. (^o)

120.0

Alt. (m)

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F035236	Metagenome	172	Y
F045207	Metagenome / Metatranscriptome	153	Y
F059117	Metagenome	134	Y
F066913	Metagenome	126	Y

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0131077_1004218210	F066913	N/A	INDLIDGVKEKLFIVYPEGALREIQTFFEPVDSIRTELEKLSCAWRFTPRVDRLRLALYGGGSFCRSDWNIVFGPPTLTTDWDLEGYYDFSAVRRLNLIKTRNEKSAQRADEAHWLATEALKGRNPLDPTQPYSPGYAQRLSALGAAQLGNLMVEMGDTQTAMLELDQEVLNDRRRRRLLDHQTATLVYAGLTTLRDTAPDPALLLLGDRP*
Ga0131077_100421822	F035236	AGG	MNLLLGLPFIVVVWGLLLPLLFLDGAEAYLRFLWENPALVAVLAANLAVPSYWLARRLSQALLLRGTGAKLRATHEPP*
Ga0131077_100421824	F059117	GGAGG	LSASDSRFVAIWASHEARARLWFRLFLLASAGMALSLVTTIRVWSRPREVIRIGCDGIPQVVRLDNTAYSEPNEREIRAFATQFAVFYARSDSYSILNDLVWCANRMAPELRERFKRAVRGAPEAPGVITVIEKLKRRTQIDPAALEIHVDKGPYPWKVQVKGMRQVVGEEGPGETFELEMSLVRASREEQLEGLLVWGIRAKGEPIDTVLAAVSAEGGRLP*
Ga0131077_100421828	F045207	GAGG	MTTRRSVRVAVVVAVALLSTGCTADVLGRMKGFDVMQIIRSAPVAEAVQKAKTIGQVLAGIEALILAFVSWYRIHTGTPWLAVTKDWFLGIFVCAFILTAAGTPVGLEQWIWNVGVYLGQQFNPGQGFLMENFNKAVGQHSELILTLQRLAPNLDEETRRIVEAITWQFSSPFMAGFVGLNAIAIYLMKMVMQVSYAWLISFYWMLTPLVAPMVILPQTRGVFLGWLKTYVAVALWPMFFAFAERLALAIPWSAWLGEFDGAVGSWEMATNWFQGELMLLVFNITFFFVYLSIPIASYLIVSGASRPFRNF*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0131077_10042182

Overview

Ecosystem & Geography

Associated Families

Sequences