Scaffold Ga0131077_10006283

Overview

Basic Information

• Taxon OID: 3300009873
• Scaffold ID: Ga0131077_10006283
• Source Dataset Name: Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Novogene Bioinformatics Technology Co., Ltd
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 26137
• Total Scaffold Genes: 34
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 16 (47.06%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community Analysis In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location

• Location Name: Tai Wan
• Coordinates
  • Lat. (^o): 24.0
  • Long. (^o): 120.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F018203	Metagenome / Metatranscriptome	236	Y
F027528	Metagenome / Metatranscriptome	194	Y
F075799	Metagenome / Metatranscriptome	118	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0131077_1000628318	F075799	AGG	MQQREEVCVPWSWPELVAVREAIELTPDFNGRDEVRAALAARAPATQHRDVTLDAGLAERLATNLLAFDLQTIVAKSKLLRALRSTEQG*
Ga0131077_1000628323	F018203	GAG	MRPAATVRVQWTRTELLALREAIEVTPNFEGRQELRDFFRTAVRAHRLGKLELDHELAERLGNRLVPVDLATATARGKLLHAVRGPRKRGVTDVRRPHPSVAAA*
Ga0131077_1000628324	F027528	N/A	MRCEGEVRIRLSRTELNAVREAVELTPNFDGRLGVRDTLRGAVRARSRSVTLEREVAERFVRRFVATDLPTALVRTKLLRALRDADRRAPAHRPAARAA*