Basic Information | |
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Taxon OID | 3300009873 Open in IMG/M |
Scaffold ID | Ga0131077_10006283 Open in IMG/M |
Source Dataset Name | Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Beijing Novogene Bioinformatics Technology Co., Ltd |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 26137 |
Total Scaffold Genes | 34 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 16 (47.06%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (66.67%) |
Associated Families | 3 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community Analysis In Wastewater Treatment Plant From Tai Wan |
Source Dataset Sampling Location | ||||||||
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Location Name | Tai Wan | |||||||
Coordinates | Lat. (o) | 24.0 | Long. (o) | 120.0 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F018203 | Metagenome / Metatranscriptome | 236 | Y |
F027528 | Metagenome / Metatranscriptome | 194 | Y |
F075799 | Metagenome / Metatranscriptome | 118 | N |
Protein ID | Family | RBS | Sequence |
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Ga0131077_1000628318 | F075799 | AGG | MQQREEVCVPWSWPELVAVREAIELTPDFNGRDEVRAALAARAPATQHRDVTLDAGLAERLATNLLAFDLQTIVAKSKLLRALRSTEQG* |
Ga0131077_1000628323 | F018203 | GAG | MRPAATVRVQWTRTELLALREAIEVTPNFEGRQELRDFFRTAVRAHRLGKLELDHELAERLGNRLVPVDLATATARGKLLHAVRGPRKRGVTDVRRPHPSVAAA* |
Ga0131077_1000628324 | F027528 | N/A | MRCEGEVRIRLSRTELNAVREAVELTPNFDGRLGVRDTLRGAVRARSRSVTLEREVAERFVRRFVATDLPTALVRTKLLRALRDADRRAPAHRPAARAA* |
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