Scaffold Ga0131092_10004306

Overview

Basic Information

• Taxon OID: 3300009870
• Scaffold ID: Ga0131092_10004306
• Source Dataset Name: Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Novogene Bioinformatics Technology Co., Ltd
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 28479
• Total Scaffold Genes: 28
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 19 (67.86%)
• Novel Protein Genes: 4
• Novel Protein Genes with Ribosome Binding Sites (RBS): 3 (75.00%)
• Associated Families: 4

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Activated Sludge Microbial Community Analysis In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location

• Location Name: Tai Wan
• Coordinates
  • Lat. (^o): 25.0
  • Long. (^o): 121.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F011832	Metagenome / Metatranscriptome	286	Y
F021078	Metagenome	220	Y
F035819	Metagenome	171	Y
F078364	Metagenome	116	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0131092_1000430620	F078364	AGGAGG	MPLFDRYHLSQEEAEARLKRTLTGDPTRGEIGLLAALSANKLDDVQNRLARDASLGQDLRDLVTEHLQKARARWETRRAWSVTLPLPVWDEYAREARITGRSITECLVSAIRRDYERKKGTLEPMETLDQNVRAFHAAATQLLEEARQVMERVGPLQEIGLRLSRIESAIGGRVAR*
Ga0131092_1000430622	F021078	GGAGG	MEPKKDELGVRLDDDLQERVSGYARREGLTAGEAISALLYVGLEFAERQRTGLKDDIEDLQRELRDLKQMVDVLGPAALGTQRILTHWAAQTGGLRVSEDELLAEGRLVAEEEWQGQLAERGLFSPGALVGKAEG*
Ga0131092_1000430624	F035819	N/A	VKVDAALRREIDAYAEAHGVSRSRAAGHFLAIARETIHEREGVPGSRADELMEAVDGMRAALDILGPPTFGMLRLMAHWASQGGGVKVNEDELLAELRAVGADEWEQAVAEAERDLHETAAGAQPKERR*
Ga0131092_1000430626	F011832	AGGAGG	LNRRRRIQPKATVELETVTLRLPAQLVRGVDQYAKYLGGSTDRTHVITQALEIAMAQDAEFQKTLAARPAAPALGPVRATA*