Scaffold Ga0130016_10009136

Overview

Basic Information

• Taxon OID: 3300009868
• Scaffold ID: Ga0130016_10009136
• Source Dataset Name: Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Novogene Bioinformatics Technology Co., Ltd
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 16513
• Total Scaffold Genes: 20
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 14 (70.00%)
• Novel Protein Genes: 6
• Novel Protein Genes with Ribosome Binding Sites (RBS): 4 (66.67%)
• Associated Families: 6

Taxonomy: All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location

• Location Name: Taiwan
• Coordinates
  • Lat. (^o): 25.0
  • Long. (^o): 121.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F036462	Metagenome / Metatranscriptome	170	Y
F038776	Metagenome / Metatranscriptome	165	Y
F042051	Metagenome / Metatranscriptome	159	Y
F042607	Metagenome	158	Y
F071164	Metagenome	122	Y
F094469	Metagenome	106	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0130016_100091361	F094469	N/A	MNKNALAKILQHPDKDEIISKLIIGISSNDIHDWLKAKYTNVSEYKFVISEKSINSFQSNYLDIYNMINEDLAKSKSALAQSTEEQLVLSVQNNPTYKNKMLELAGKELDIKKIVTNLCVAIESRLAQVFDEIQENPRDINTRIDRLLIDYAEVLGTILEKYYKFTEEPATHVVTNNVNIQVVEHISIFHDVIKEVLSQMDVETSLYFMEVFNEKMSKLKPPSDKNVPNTEMRLAEAKLLNEEIDKKINE*
Ga0130016_1000913611	F042051	AGGAG	MTTTFGEVSWNDDIFSGSEKKNSKDLFLRLDEGSNEMRIITQPFQYLVHKYKKDGDPGYGQKVSCSAIHGSCPLCDRGDKAKPRWLLGVISRKTGTYKILDVSYAVFSQVRKYARNTARWGDPTKYDIDIFVDKNGGATGYYAVQPIPKEPLSVADQQIKDSVDFEDLKRRVTPFTPEMVQKRIDKLDGVTGESVEATPKTAAKNKAKAPAQVNMSDEDDESFPAYDGDKPAA*
Ga0130016_1000913615	F036462	GAGG	MTDKVSVRDFLGDKFEEDFLEFDLTEIQEVLGKLQNIDAIDLSHAELLQQQALRGADIITEYLGKIIKTIGYLEAKVNSTKNKAALNYQEPNGNRTTSDMKKWYAESAPEVEELQIKLAKAKGSKILLEKKYDILIRSHHHYKDIASGMRKTILGYSQPNKEKVPEGYE*
Ga0130016_1000913616	F042607	AGGA	MPLIAIDNKRVDLTYDEINLYNKIVASYTNSTNKGEDLFMDLFETDDNGTIIFLKPPSKRQTSFEIFLFLMAIMQQQHIRLMYKQLESMCAEVRENLKQKP*
Ga0130016_100091362	F071164	GAGG	MRISEMLTAIASWLESPDNEAILLAEYDDDCLEVVATSCVQAAKLLKITAEAVEDIEPPEESKITSESIDGLANLANVFDESGDPELKKQASVIDELLLTIASPPDAVVQRQDLVDKRLDELKKKYEQTGKDLADTNKIADSEKAIEKSQMTKQMDILEAPLSSRYCPDHPGAQIARVGEHTWQCELDKKVYNFETGFTLNNGTKVPGGDVSNQTQPIDIPYYNIFDSREGRMNG*
Ga0130016_100091365	F038776	N/A	MGDAMSKFAINYSSLENTIYKKAYRLEDVKDNIERVAFDVVRFKDDDNGANLWQIQSADDGDYIVSIYEPDPEEKVAANWSVAINKISGDMQISYKGDPLVRLAYNRLGIPRSELNKAEQYLPQKLADNKKLVNALLNELNESAKKEVLSKYPELV*