Scaffold Ga0130016_10001096

Overview

Basic Information

• Taxon OID: 3300009868
• Scaffold ID: Ga0130016_10001096
• Source Dataset Name: Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Novogene Bioinformatics Technology Co., Ltd
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 56865
• Total Scaffold Genes: 29
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 10 (34.48%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCN 57-15 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location

• Location Name: Taiwan
• Coordinates
  • Lat. (^o): 25.0
  • Long. (^o): 121.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F063287	Metagenome	129	N
F102365	Metagenome	101	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0130016_1000109621	F063287	N/A	VIRALPQQRNRVIVSSASRNQQFTGVNWNGTPTRPIFALVRTQSGERPLGAEGYDLLGHEGRHAAYGDRKLFRHAIDSGIDQANELLFPGMVPTMGAGLLAIWLVRKSGEQLTFKDTLKIKELILAQPELLNGWCEVETDLFNPENRSYRVFAEPDPAVLKRIVKAATQS*
Ga0130016_1000109625	F102365	AGAAG	MLKWLFRKSAPAPPENQGEVRRRLQAAQRLVRQQKESKDAPEIPKQGPPGNCAREILPSNGPDAAISYRLPSPPPARSTLAAALESILQGRRVNPELFTQLYRGGFVFKDPHGRWAITEMGKGLIEQNKLFLPDRCLVDGVECASGWNQ*