Scaffold Ga0130016_10000419

Overview

Basic Information

• Taxon OID: 3300009868
• Scaffold ID: Ga0130016_10000419
• Source Dataset Name: Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Beijing Novogene Bioinformatics Technology Co., Ltd
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 93518
• Total Scaffold Genes: 95
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 41 (43.16%)
• Novel Protein Genes: 29
• Novel Protein Genes with Ribosome Binding Sites (RBS): 12 (41.38%)
• Associated Families: 29

Taxonomy: All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCN 57-15 (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater → Activated Sludge Microbial Community In Wastewater Treatment Plant From Tai Wan

Source Dataset Sampling Location

• Location Name: Taiwan
• Coordinates
  • Lat. (^o): 25.0
  • Long. (^o): 121.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F035367	Metagenome	172	Y
F037183	Metagenome	168	N
F037652	Metagenome / Metatranscriptome	167	N
F038201	Metagenome / Metatranscriptome	166	N
F045016	Metagenome	153	N
F045053	Metagenome / Metatranscriptome	153	N
F045301	Metagenome	153	N
F045645	Metagenome	152	N
F046997	Metagenome	150	N
F050262	Metagenome / Metatranscriptome	145	N
F051331	Metagenome	144	N
F051827	Metagenome	143	N
F052500	Metagenome	142	N
F055381	Metagenome	138	N
F057234	Metagenome	136	N
F057853	Metagenome	135	N
F058854	Metagenome	134	N
F058930	Metagenome / Metatranscriptome	134	N
F061478	Metagenome	131	N
F063031	Metagenome / Metatranscriptome	130	N
F063278	Metagenome	129	N
F063304	Metagenome	129	N
F064316	Metagenome	128	N
F078490	Metagenome	116	N
F080330	Metagenome	115	N
F082057	Metagenome	113	N
F091215	Metagenome	107	N
F094220	Metagenome	106	N
F103684	Metagenome	101	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0130016_1000041912	F057853	N/A	MSKLEQFILFHLFKAPALLLAAALAGGVAAGGLQHETRRIRGLVQSRAKLDLELIQYDSHFLSTNSSVESVLSAYQIPCRTLTNHPFQLELDYEAAKKLERVGLLVSAADFENGRLTVTLKDYPEAK*
Ga0130016_1000041915	F051331	N/A	MKDLICLAMLLLTPLSHAGTVKMWDGKTRGMDLVTVGHKRVTVFLADGRTTVLGIPILVEKPKAAVPVTGNPPATPKR*
Ga0130016_1000041916	F061478	AGG	MQAATIEIHYDGKPMEVFQQIRVGRLRLYNAAARDRLGVVQETWKRGALGKTFLVRPITGQVVGEEVVDNAGRVIAVFGLAITNAFLPDPRPQREYREKLQTLLKEL*
Ga0130016_1000041918	F103684	N/A	MKKRAKIILLALGGLAIALFLLLWLMPTPRTLTQQQLKAEYTRAAQRLYRHEILSLCKPPEEAFTPHGLQLLRRIQELYSPVFLPYLVMGSVPVQPDVLYNPWFDLFILVEDSDGEINSVGLASSLAAGQAPQLQVQERFWQELYRRYPVAQMATFSRPKAFENTGRVMLEMRNLTNRFGWPGRVQLSGVRVSFELYLQRPAQAIYCSPTEPGTYVVFNYYNDRLHTNVMALAPYHVRQVEQLIEETAKKGRDPRRRS*
Ga0130016_1000041919	F094220	GAGG	MNTLEAIRRMAGIVPEHNLKEVQALPHFNTWGVDSRPGQLPSILYVGEGSRDFGAPCWPFMAAHEAMHSIATFYLQTDDYRFVLYNICEDWRVNQCLLGMFYEKLNKSFKEARQTILRRWEKEPLKLKSPVSQVLQHLCYLNHLSGKEAALPVSDAYLKEVLGIREQFGSAENWPLVPPDPNGSARREENARISGRLTKLILDHRVPPNVSPAELRAIMVRTGYDLQFSSTIGLPPRAGGCAHCRQSAPESGNPD*
Ga0130016_1000041926	F082057	AGG	MDLIFQPGAFWLVIVDNRCTVLRIHSTRNKCQFPGENGEHPLDRVQEWLSPVWTATMVKCVQCLRKVAQKLQPGVRLEICDECRSAAGAPRPMSYWLGYLDDRPEVVQVVENGVRLPGKQETYPLGQVREWLMPIWGPDMVYCPGCCQAKPKKDIVFFFRRSPKGVCKDCSENFDFDDAKATAPA*
Ga0130016_1000041932	F045301	AGGAG	VKIIPYNRKINAPLRFLYYLEVFDLFVITVLGFLAPLGASTFLPVDIPTWHMLLWLVGLTFTLIIIKIGRAPGFIQHRMAQLLRPKSYHPGRRRLPHFLLNPAVYQGEVEAARHPEQPFTPAELQQIQNNSRRLRQARREADLLA*
Ga0130016_1000041947	F058930	GAG	MKTLMPKLLIGLCALILLASPHLALAQTQGGLTVDNFNDAANESSGLTSTLYTVTHYALYIFYLLGIIFMGIAAIKFKGGDMEAMGKNLGGSVMLFLVPKIVETLITWAAK*
Ga0130016_1000041954	F037183	N/A	MAETLSLTLELPKELVTRVKAVKPSWLAELTDEEYLSHVIAKGNFDAYLQQLENANAAVKKLAADLNLSKRGGPAQSKNNKAGQRPGNKAGPNQPGEKSATAPVT*
Ga0130016_1000041957	F080330	AGG	VKKSAPFILSLLAAGTVLAGDPFSGPDANQSGLADGVRLSARVVENVYLMPEQITKLIFPKAVEEVSVNTQVINIGRNPPDSKEYYLLLSPKVAQGDVDMHVVLEGKTYTFRLIVGRDKVNYRKTYTAEGGGSGRSLRKVPPLAPTEINTTRLIHIINQSMRDPNYASVVAKDIGSSPQGATYLWDGAEVVLQSAWHYYPQDVVILQVEVHNPTSRAVYLSATQLEPFIANTTFHYLLTQQGTKVLLPGQTDIKYIFLQGCGIDIEGARFELRLPAAATQLNAQPQQNP*
Ga0130016_1000041958	F037652	N/A	MDPIPYTHFWSEEPETQRRAWRPTDEVRRRLMRLWIIQALLLGAIVLVAGVLTRESKRVPPIYAKLPNGVIFETTTGNLQMDRLARTELVNNVLQILYYQEGSFNYLETVKQNVKPQLLGRFRAEMQNASKQTNSTVYLNVVETFEALNVPAKGFDAVTKGVLSKRSNQESASAPIYIRTRWLLAGDRYLLSRVEEIRPGDYYELFLAEKERLKKLSKPELERELGVRKNQEIPLPNRNHLF*
Ga0130016_1000041959	F064316	N/A	MLGNAQEEASLEVADPKAVKPARKVGALKMLLRQFEATGNPPLQGEEVLPTKLVGDGNYHWYSLAWLRWLAQWERLKTLVLVIILLALLAVYGLIRQRRTCQVTLPEPSTEMLLKAKGFDAFNQNQAEAFILFVANAANQASSEGMPNLNLLEGSIDSAIYLRLQQKGMSQQLKNVLPSEFPIYTLYISEVTRWRYNPATRIVSACVKGFRMSHTFSGKSGMEPYRAQMEIFWEPMSNRNKWGYYVQRLDEFYGAAAEAYDAELKTRDRTGA*
Ga0130016_1000041960	F057234	N/A	MEKIEFKLDGPSVIGPRRGCILLARFQLVGRQQELGSIFCDYGMLAGRSLQFFNCRAKTFLLDCPVPCDYALKVDAMTLPGDQVVEIFQLPTPPWYHRLEEDALALARQSQDLAEDAGLAGLFSSLTQ*
Ga0130016_1000041962	F050262	N/A	MKITFHRRQRTSGATLVEMVAAIIILGLVVTGVAQFLLVSKINVYTDNVKTGVLQALSDTIVKCQTMSVGETNVPVGDDLLPHVPSGTMRLEKSGPANGVYTLQGSVTWRAFPHGDDSFLFHEQLTLEVPE*
Ga0130016_1000041964	F055381	N/A	MKLLLKLLFILPALAATGSSIREIYLPPWYDNASFQTFELEIRDLPVNYVQLDHPCTLFCTNQVVMVSNGMARARLLIDLKKTPATFPIIVMAPDASGRMTPRQKLICHLSLVPLPIQVEVRGDTFTVTNLTEEPFELERTEAVNITSQDDRHIAGTLNGSGRLKLKGKAEIRLNPKPGSGGPG*
Ga0130016_1000041965	F058854	N/A	LNARWQGCAWQANRLELSGLTYQGALFPLITQGPGAFSLPSGAFVLRLHVLPLNARDNEPVLVLWGRIADPRDKPLARLFLRKGRLVWVCPIDAKADSLFDAPKEVELETRELTPGLWATVDVFINPLPYQQTFGWNLEMNHPQDPAKPSGRPLHLARQLTSADWTLQKIEMPRLHAAWLGQMELLPADTPPAQLRPNILRQ*
Ga0130016_1000041966	F046997	N/A	LAQDKAEAIAIFRASQQPVLWLRAMSGISCIENKLQSTPTNAAAETSAILLTLGEKKLTLHADVLKKSYTACQPTNGLPLYVDRNRRRAPETYVDPEILKGGVNILTPKGTNQVPACLSGEALENYLRLRCDQKLQPGDYWRELHARKLDDEQLARLRYYDYLDTHVALRSVPVYQCMEIRSRNH*
Ga0130016_1000041968	F035367	GGA	MPAAAKWMFILVLNAVLCGFFGLGIAVVHFLWLEYATVRWPKVRYTDDYQTALALACAAVVFVLTTLRQIKTRLESKSLRPGEIGFILIFAAIVMVGLTPVPGSNFPQYLYEMNYPGNKDTSKQEPKSEEEAKPLKLKRDYP*
Ga0130016_1000041969	F063304	N/A	MRLNNSTPDRAVSPHIYNLLDQRLAQQGAPLHQLIRTYAAAVPAQPASPEELLNQLTAVLGKWEADPAQRVKPETALAEEHLRLMDDISKIQGPEGASRLEATLVRVVANQFARNMGSALRIPDESKLICLSDVKPGNAYSAFAQRTALIGIQPHEWVKRWVEPQRDLFRNKPSDAGYLRLAQRLSGAWPLEPGKGDAFQRALASFLDGIAASTSQSHAVVVQSSLLETFARAIRHQARDLGLDRPAAPSPAMSMS*
Ga0130016_100004197	F063031	N/A	MNPHHLKLPVIIDLQPEPENAILRLPDWMKYLFILLYICTLFGLGLLLKEGYGFFQLYQLKVQALRTAEQATRDIAALNQTLVENRRTQNSYEQFKYRQRTIARPGPLLDWLPTLVGRAQRAHFISLQQANDRVNVRVTLEKAIADSVIQNPAPPPDYQIVQSGEETPKYQELPTNQRPSPKNEYAAFAAQLKKP*
Ga0130016_1000041970	F063278	N/A	MKERYLVIGFQPPTRRISLDSERAESATDAMRAVAGMRKAADVLLAWTPGQMRLMADLLAAMTPQQIAFNRRTAELEERAFRATQTAPPQVRTAGPQWQPFLVISYNPDTESVHLDPELNDSSDAALRSVAGIRGRAHVILALTPEQLREMAASLEGLTAEQMARNRRAAEQEEKTFNAELAARQ*
Ga0130016_1000041971	F045645	AGG	MGQDLHKCGTEDLDMKLQETMLTVLKSVAGVYAVRPIIRGKALALRQGRDGHELAQDEGQAVRVVAVSDAKPSLLSFAAINGIPVKNYTDMAVPKPKAPSAPKPTEVPELVM*
Ga0130016_1000041972	F038201	GGCGG	MDVFTRNVQYMVSQVAGEHAARTFLMLQSTFPGVRNFDQLRTFARLYVSTGLKPLQFRPLPSEVDPQRLKGELALRFHNGMIVLAPEERIVCRGADAYGPFDPVRAARFSRQLSAESPTNDDQGHALDPEACAPAAVGMFPLDLS*
Ga0130016_1000041974	F051827	N/A	VKSQVYLVQDCGGVSLEVVAGPFDSEAATEIEEAIIQRVKADSSLRHEGDDTLHTLEIAPDRKPEFSGFSGGYMENIRWVAAGCPPPGKPDTWDQPDFALNTKENAMATHGIPNE*
Ga0130016_1000041975	F078490	AGG	MACRKQRLTRVEVEKCEFNGHQLRFVTGRTRDRAGSRKLARLTFLPLPAGTYEKRIPREITRLLIP*
Ga0130016_1000041981	F091215	AGGA	MRPTADETIRFYREDGAYVLVHDGTLDGGANLHYIIRLIGREMRLKLKSLGYFGQGTHSQERFRGGQPIDEHAFARRTRHLLRLPLAELAACLMAKGVLGPKPGEPVFGDLNEKTGAAALKEWAISYYEANEITCPGSLNTLERNRLFRWRRIPFEYLRHNLQGSYEIPVKVECYRQLLGKGHPLPPLICRRRGWDLLEGYHRLSAHEKVGSQTIPCVIIGRS*
Ga0130016_1000041982	F045053	N/A	MTTIASYHIPGFGTVDVVQQNDGRNRFWDLFAASGECLNEGHPFWSKPRRKQVETFLAHDLKEALARIEKECERLQITQEDLDEVIHEAAQASNRRLNQVSEEKQQERLITTAEEQAARANNGGRASQLIYLLEAYGEAGAVKALQDRHETNG*
Ga0130016_1000041984	F052500	N/A	MTTQVQRHRASEIAGEIKKLQGIKSAVVDDDNGHGSFNLFIELRNRLEGHYHLSRRIEFEIPLHGLMARITRIIKRHGARLEWHEPPRRQYARPGHGKKLFEGYSTDSYKVSVHIPQPAEEVQPHRETQLAFA*
Ga0130016_1000041985	F045016	GGA	MTLAIARPPGVTGASLVNAACRKYQEAVDKFKRVEAEWQTLPTQEAVMLVVETQGILRETRQLLDQGTSQMTGMNSPEWGEATGHNTRNEVAECLQDAHDLGNRVDDLLAGCDRLIETCLAHQEAYERYQTGKALCIVLAGAILTIGVALYFLLR*