Scaffold Ga0131806_1014028

Overview

Basic Information

• Taxon OID: 3300009855
• Scaffold ID: Ga0131806_1014028
• Source Dataset Name: Hot spring soil microbial communities from Dewar Creek, Kimberly, BC, Canada ? 2012, Sample 2
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Calgary
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1894
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (25.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Soil → Wastewater Microbial Communities From Base Mine Lake, Ft. Mcmurray, Alberta, Canada - Surface, May 2015

Source Dataset Sampling Location

• Location Name: Kimberly, British Columbia, Canada
• Coordinates
  • Lat. (^o): 49.9543667
  • Long. (^o): -116.5155
  • Depth (m): .01

Associated Families

Family	Category	Number of Sequences	3D Structure?
F029929	Metagenome	187	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0131806_10140284	F029929	N/A	GVERVPIFQQSVDTELYEWLMRELKRRGARSIQEVIRQILREALAEAEKQHG*