Basic Information | |
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Taxon OID | 3300009658 Open in IMG/M |
Scaffold ID | Ga0116188_1019627 Open in IMG/M |
Source Dataset Name | Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 3735 |
Total Scaffold Genes | 5 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 4 (80.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (50.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Cloacimonetes → unclassified Candidatus Cloacimonetes → Candidatus Cloacimonetes bacterium ADurb.Bin003 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge → Active Sludge Microbial Communities Of Municipal Wastewater-Treating Anaerobic Digesters From Various Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | Japan | |||||||
Coordinates | Lat. (o) | 34.65 | Long. (o) | 135.05 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F047076 | Metagenome / Metatranscriptome | 150 | N |
F077342 | Metagenome / Metatranscriptome | 117 | N |
Protein ID | Family | RBS | Sequence |
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Ga0116188_10196271 | F047076 | N/A | LIVPELTVKAFVQFYNIAFEKISREVRLLTITFKPTTVSQYENILNLIAAKIDSVKDTSGDDVYWEVRHRKLLIYDSNKELITNATIGNHKLEIEYWARISGAMKPFPTDTGIESDPNAIEYAIEEWNEAGCGIDDTEVQLCALYLMITELAGIFPLEPGTVELYANKFSGAFQAVKTKYNSGNSPATITQVHF* |
Ga0116188_10196274 | F077342 | GGAG | MARTLNEFIVSTGNYVYEITDAEMAGVDLTDFNVAVLLHCVLSDESEKDFIVFSKGRIDQVFDISSKSVPDFMRYSLLYSPTYCRNAGNGIFIVSLPFWRMQRIAESENSDIVSAEFEVVIYGFNTLEYPKGEDEGTASFQCIVIDTGTINFTKNRFPLPLTSVVDEPVQGQLHQLHPREII* |
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