Basic Information | |
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Taxon OID | 3300009593 Open in IMG/M |
Scaffold ID | Ga0115011_10016504 Open in IMG/M |
Source Dataset Name | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 4900 |
Total Scaffold Genes | 7 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 6 (85.71%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Tropical Atlantic Ocean | |||||||
Coordinates | Lat. (o) | 15.249 | Long. (o) | -20.515 | Alt. (m) | Depth (m) | 55 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F008210 | Metagenome / Metatranscriptome | 337 | Y |
F066837 | Metagenome / Metatranscriptome | 126 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0115011_100165044 | F066837 | GGA | MEHKMAENETDRSVEIKDMLDNIIAGNNAEAQQQFKDQMASRTGEALDHLKQDKANDVFKQSVDPDMEPQGVALDDALVDIDQTTGRPVEGETNGEDI* |
Ga0115011_100165046 | F008210 | AGGA | MAVTVNNLKLTQVQGVVSVRGTAATGTIALATTLKKSTETQSSPAANIKGLHWTLSSGASAKVQRNSVVLFELHESGSIDFYGFAENSENTSDIEVVIAGGAGGTVIVDCAKVSGYGSQQHQDAPLDTNDAGNVYNGGSLG* |
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