Basic Information | |
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Taxon OID | 3300009529 Open in IMG/M |
Scaffold ID | Ga0114919_10101730 Open in IMG/M |
Source Dataset Name | Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2088 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon CG10_big_fil_rev_8_21_14_0_10_34_12 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface → Deep Subsurface Microbial Communities From Various Oceans To Uncover New Lineages Of Life (Nelli) |
Source Dataset Sampling Location | ||||||||
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Location Name | Atlantic Ocean: Black Sea | |||||||
Coordinates | Lat. (o) | 44.288 | Long. (o) | 34.983 | Alt. (m) | Depth (m) | 2075 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F008189 | Metagenome / Metatranscriptome | 337 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0114919_101017302 | F008189 | N/A | MDYQNELNKLSDSAYWKPKAGQFKIKALSELLEAEPFIKKIKNEQGVEAEEKSEQFKLVILIGEEQKVWTFGKGKTPASTYGQLLQLAVKNNNNLTGVEFIVVVKFDGTKNDYTIV* |
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