Basic Information | |
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Taxon OID | 3300009512 Open in IMG/M |
Scaffold ID | Ga0115003_10120156 Open in IMG/M |
Source Dataset Name | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1607 |
Total Scaffold Genes | 6 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 2 (33.33%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (33.33%) |
Associated Families | 3 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From Western Arctic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Arctic Ocean: Canada Basin | |||||||
Coordinates | Lat. (o) | 79.2466 | Long. (o) | -150.0613 | Alt. (m) | Depth (m) | 25 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F006684 | Metagenome | 367 | Y |
F009110 | Metagenome | 323 | N |
F030097 | Metagenome | 186 | N |
Protein ID | Family | RBS | Sequence |
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Ga0115003_101201561 | F006684 | N/A | IIASALALGLLNHAINKAQDHIETLAEVLVHHADTLEDHRGVLLQMIDDRTLPYM* |
Ga0115003_101201563 | F030097 | N/A | MKALDIAGTQTKVSSCMGFVASGAARDAYRRLLTASTVGQSKGEQRKSVFSRTTKEKVKK |
Ga0115003_101201564 | F009110 | GAG | MTESMITSAVRYMESLKDKVPPAGEEVITVKQKRPDTPHLKTLGLDPHKMVKAVDKLKAKGLEVKDACEQVGMTRSQYYKTKKGTTNRK* |
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