Basic Information | |
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Taxon OID | 3300009436 Open in IMG/M |
Scaffold ID | Ga0115008_10098074 Open in IMG/M |
Source Dataset Name | Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2181 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Bathycoccus → Bathycoccus prasinos | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Eukaryotic Phytoplankton Communities From The Norwegian Sea, Arctic And Atlantic Ocean |
Source Dataset Sampling Location | ||||||||
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Location Name | Fram Strait | |||||||
Coordinates | Lat. (o) | 69.2303 | Long. (o) | 7.7302 | Alt. (m) | Depth (m) | 10 | Location on Map |
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Family | Category | Number of Sequences | 3D Structure? |
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F061264 | Metagenome / Metatranscriptome | 132 | N |
F090859 | Metagenome / Metatranscriptome | 108 | N |
Protein ID | Family | RBS | Sequence |
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Ga0115008_100980741 | F061264 | N/A | MSDECFKNVRNCLKRAKLEPVLTKIREDELANPITTLNYLQALFVLLNNYPGLLPEFKPDLDWLNSFNAKAKLATSAYLAEKTKYTIPFNFTQIRELFEDRFGKNTDPYTYISLYEEAPSRDDWGSVMINPPPMDGQKEKKMNYIVRGDDGIWTFYLNVYKTAKFFDFKRFDTQFSPEVSKIIDAHIKRNKYKDGDYIFGKPEKDGRMSSIVGNWLIDAGVKDGKPAKETETPGAINILRHAYVTEYFPDSDRQKLSEALKHSPLTTPFYVREIDPKLTEKMLEIQKNKISYEEREPMIMTRSKTRKKN* |
Ga0115008_100980742 | F090859 | N/A | MRTTVIYKLYSAKINKSFISYTTDMKRAMCNLKCYQKTGRVHRSKSADIIAQDDAKCIVLQKYEDAPNRNFILGELNKFKALEDQDVLVNKLIFLKSKEARLKENREKYHETNAQLKYYYANKFKINRANVLKKMKKTGRLPQEGTLRKYEISQEEVDACI* |
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