Scaffold Ga0103752_1038780

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0103752_1038780

Scaffold Ga0103752_1038780

Overview

Basic Information
Taxon OID	3300009392 Open in IMG/M
Scaffold ID	Ga0103752_1038780 Open in IMG/M
Source Dataset Name	Microbial communities of red sea marine sponge, Stylissa carteri from the coast of Thuwal, Saudi Arabia - rep 2
Source Dataset Category	Metatranscriptome
Source Dataset Use Policy	Open
Sequencing Center	University of Wuerzburg
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	714
Total Scaffold Genes	1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → Microbial Communities Of Red Sea Marine Sponge, Stylissa Carteri From The Coast Of Thuwal, Saudi Arabia

Source Dataset Sampling Location
Location Name	coast of Thuwal, Saudi Arabia
Coordinates	Lat. (^o)	22.23	Long. (^o)	39.03	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F010384	Metagenome / Metatranscriptome	304	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0103752_10387801	F010384	GGGGG	MQPQLGILKRFIRSLSGVDRCSLSWGSGRGLFEVYCRGWTDAASVGDLEDVY*

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