Scaffold Ga0114977

Basic Information
Taxon OID	3300009158 Open in IMG/M
Scaffold ID	Ga0114977_10026192 Open in IMG/M
Source Dataset Name	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	3655
Total Scaffold Genes	8 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	5 (62.50%)
Novel Protein Genes	4 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (25.00%)
Associated Families	4

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake → Freshwater Microbial Communities From Northern Lakes Of Canada To Study Carbon Cycling

Source Dataset Sampling Location
Location Name	Lake Simoncouche, Canada
Coordinates	Lat. (^o)	48.2311	Long. (^o)	-71.2508	Alt. (m)	Depth (m)	5
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F008995	Metagenome / Metatranscriptome	324	Y
F017466	Metagenome / Metatranscriptome	240	Y
F021290	Metagenome / Metatranscriptome	219	Y
F024952	Metagenome / Metatranscriptome	203	N

Family

Category

Number of Sequences

3D Structure?

Metagenome / Metatranscriptome

324

Metagenome / Metatranscriptome

240

Metagenome / Metatranscriptome

219

Metagenome / Metatranscriptome

203

Protein ID	Family	RBS	Sequence
Ga0114977_100261924	F017466	N/A	MRAREFVAEARFGSAQDVPADAKKLPKSHASAIKGAVSMPDISMTKQGGSPYTQWRFSLAMAGAPDFPTPAAGAFAGDPLLATYTDVEMDIINAAAKSVGAGRVNKLTDNRSTEADYVQKTSPVKGFRGYPR*
Ga0114977_100261926	F021290	N/A	MRAREFITEGAGKRGGTRAAAAHEFETAHPGIVGPGGKGDVYWGRYYDHYRVATLAGMDLEQLENSGDINFFGNLPIFSAYTEHDRKKLTAIMKKLGMKPRDSISNGSHEPDYVNHTSPVTAFKGYAR*
Ga0114977_100261927	F008995	AGGA	MAIQVINAVSNVAWTTDKVEIATTTANVTFQVSVVQLTYVQANGVPANATMTTPTGNLYANVIVVPGNTVQQYYVGAGNYLNIVTGTGFSATALGAASSATAGSNGI*
Ga0114977_100261928	F024952	N/A	KKASCESLLTSGSNMTQQYQTYAETMSRLAERHPPAPTPAEVRNQPAMIPGVLSQTTNLFRPVAVADLNKESK*

Protein ID

Family

RBS

Sequence

Ga0114977_100261924

N/A

MRAREFVAEARFGSAQDVPADAKKLPKSHASAIKGAVSMPDISMTKQGGSPYTQWRFSLAMAGAPDFPTPAAGAFAGDPLLATYTDVEMDIINAAAKSVGAGRVNKLTDNRSTEADYVQKTSPVKGFRGYPR*

Ga0114977_100261926

N/A

MRAREFITEGAGKRGGTRAAAAHEFETAHPGIVGPGGKGDVYWGRYYDHYRVATLAGMDLEQLENSGDINFFGNLPIFSAYTEHDRKKLTAIMKKLGMKPRDSISNGSHEPDYVNHTSPVTAFKGYAR*

Ga0114977_100261927

AGGA

MAIQVINAVSNVAWTTDKVEIATTTANVTFQVSVVQLTYVQANGVPANATMTTPTGNLYANVIVVPGNTVQQYYVGAGNYLNIVTGTGFSATALGAASSATAGSNGI*

Ga0114977_100261928

N/A

KKASCESLLTSGSNMTQQYQTYAETMSRLAERHPPAPTPAEVRNQPAMIPGVLSQTTNLFRPVAVADLNKESK*

NMPFamsDB