Basic Information | |
---|---|
Taxon OID | 3300009081 Open in IMG/M |
Scaffold ID | Ga0105098_10662871 Open in IMG/M |
Source Dataset Name | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 550 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
Not Available | (Source: ) |
Source Dataset Ecosystem |
---|
Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment → Freshwater Sediment Microbial Communities From Cottonwood Lakes Research Site Near Jamestown, North Dakota, Usa |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | near Jamestown, North Dakota | |||||||
Coordinates | Lat. (o) | 47.0956 | Long. (o) | -99.1001 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F020506 | Metagenome | 223 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0105098_106628711 | F020506 | N/A | RWEDRGLVARDRLLGHLWVAPTVKALRLVGLDVRAWSFVIPQLAHVHAVGVVRLALEPSIPAGGRWLSERELRREAGKSHVPDGAVQLPDAPDLAAGAGLYGEDVDPLPKRIAVEVELTRKGAARLRETWTRPRHGRWTRTAYYAPPEVAGYLTGQLQRVRPRHPIQIHPLPEVPGTSYQRFT |
⦗Top⦘ |