Basic Information | |
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Taxon OID | 3300009061 Open in IMG/M |
Scaffold ID | Ga0102938_10314260 Open in IMG/M |
Source Dataset Name | Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_B_D2_MG |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 819 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Wetlands → Unclassified → Pond Soil → Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration. |
Source Dataset Sampling Location | ||||||||
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Location Name | South San Francisco, USA | |||||||
Coordinates | Lat. (o) | 37.4961 | Long. (o) | -122.1331 | Alt. (m) | Depth (m) | 0 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F075754 | Metagenome | 118 | N |
F086685 | Metagenome | 110 | N |
Protein ID | Family | RBS | Sequence |
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Ga0102938_103142601 | F086685 | N/A | SIPLVLWAVACAAFVIVGHELTHYIAWLPVATSIEYHFEEQYIEAEYPDTPFARKWAAVAGISPIIVATGLVVALIAIGWDPAASWHHITASAAVVLYGISGGKSDFVALFSLVQRLRSPAAD* |
Ga0102938_103142602 | F075754 | N/A | WYRTQVERGDYLRDTGDDAPMSHREHGLEAEGIVKAVFPGFEWWDTESFDLSRGQTRYDIISRNINRGEPRQNYLHHLLPKKEARAKPSTNYYAVVRKHPDYWLIGHINSVRFWYLCDRTRPEWWNEGTYEGGHLTYEHFKQIKTGVGISPPPAIEVFAQG* |
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