Scaffold Ga0104258_1046163

Overview

Basic Information

• Taxon OID: 3300008993
• Scaffold ID: Ga0104258_1046163
• Source Dataset Name: Marine microbial communities from eastern North Pacific Ocean - P1 free-living
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Georgia
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 815
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water → Microbial Communities From Seawater In Eastern North Pacific Ocean

Source Dataset Sampling Location

• Location Name: eastern North Pacific Ocean
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F088363	Metagenome / Metatranscriptome	109	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0104258_10461633	F088363	N/A	KLVYLFLTVLIVACSGDDDSSNDNSCPGQDALLAQYEDAALAFASSPSSTTCQEYISSLELFIQCGEGFTPSELEQFEQIVDTIDCSIY*