Scaffold Ga0104242_1065992

Overview

Basic Information

• Taxon OID: 3300008962
• Scaffold ID: Ga0104242_1065992
• Source Dataset Name: Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007_MT5
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: Georgia Institute of Technology
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 605
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater → Freshwater Microbial Communities From Lake Lanier In Georgia, Usa

Source Dataset Sampling Location

• Location Name: Lake Lanier in Georgia, USA
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F006546	Metagenome / Metatranscriptome	370	Y
F010915	Metagenome / Metatranscriptome	297	Y
F037694	Metagenome / Metatranscriptome	167	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0104242_10659921	F006546	N/A	MKWKYIGNRTGDATKGEQYIVEADELTEIYMKTQPYPQEVKVYVIQPPNLRKNYSMMRAGDIIKICNPYYEMMKYSHPGFIPVKE*
Ga0104242_10659922	F037694	N/A	MLNKEQAFLVNEFIRKNATRNLWEVSDKLYTLLSEIKKIEELPQNNETEIAAA*
Ga0104242_10659923	F010915	N/A	MIVVVQVGLDLYNLSYVKYMDHDVVQYVKHNLNAEDVAQF