Scaffold Ga0103882_10032901

Overview

Basic Information

• Taxon OID: 3300008834
• Scaffold ID: Ga0103882_10032901
• Source Dataset Name: Eukaryotic communities of water from the North Atlantic ocean - ACM26
• Source Dataset Category: Metatranscriptome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Georgia
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 715
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Siphonostomatoida → Caligidae → Lepeophtheirus → Lepeophtheirus salmonis (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Surface Ocean Water → Eukaryotic Communities Of Water From Amazon River, Brazil And North Atlantic Ocean

Source Dataset Sampling Location

• Location Name: North Pacific Ocean
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F025509	Metatranscriptome	201	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0103882_100329011	F025509	N/A	DNIEGESSCMPTGIKTDCDDSVYVTGFMASNKGFVRKFASNGGETWTKSDFLDQITEVVYDPREDVLVVTLSTENIMLINNQGQVMKTINLKAREIALGDEGYFAFHFMDGQHRIGYMNKDLELIRNYDILWQNWNDISWCDNLVPNKYGTEVYLTCSLHDAQDVIIFQTKLGDEKTYLGARAVTEEGNGNHHFADNGFNG*