Scaffold Ga0102924

Basic Information
Taxon OID	3300007982 Open in IMG/M
Scaffold ID	Ga0102924_1000100 Open in IMG/M
Source Dataset Name	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	99640
Total Scaffold Genes	90 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	64 (71.11%)
Novel Protein Genes	4 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	3 (75.00%)
Associated Families	4

Taxonomy
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	(Source: IMG/M)

Source Dataset Ecosystem
Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring → Bacterial And Archaeal Communities From Various Locations To Study Microbial Dark Matter (Phase Ii)

Source Dataset Sampling Location
Location Name	Canada: Banff, British Columbia
Coordinates	Lat. (^o)	51.1699	Long. (^o)	-116.1578	Alt. (m)	Depth (m)
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000812	Metagenome / Metatranscriptome	881	Y
F012912	Metagenome / Metatranscriptome	276	Y
F020588	Metagenome / Metatranscriptome	223	Y
F051436	Metagenome	144	Y

Family

Category

Number of Sequences

3D Structure?

Metagenome / Metatranscriptome

881

Metagenome / Metatranscriptome

276

Metagenome / Metatranscriptome

223

Metagenome

144

Protein ID	Family	RBS	Sequence
Ga0102924_100010015	F000812	GGA	LPDAVSNPSPAPKPRRWSIVAAGLLLLALALVVIYTSRSAFFSPLALVVVAAIGLAALLLQLRLRKDLTTPVRAPMWLNVLGLVFAVTAVFADIIRLTPTLLQIAALGAVVCFGISGTTVLHALHKKKA*
Ga0102924_10001005	F012912	N/A	MELLLNLAWLLLALPAFWLWRGARSVPRGSKFSPVQCVLALGCMLVILFPVVSATDDLRAMRSEMEESSANKRAIRQGSQDKTSIWKCHSQPALAAAATSLIVSDRIWQPLPSLGLFAPPSPAIRHSGRSPPFSLAV*
Ga0102924_100010057	F020588	AGAAGG	MTIDERLEALTHNLELLSLETEKHDKQIGQLGTLVTEVAEGTARLLRVVEMHEHRLDSHDDRLDKLE*
Ga0102924_100010078	F051436	GAGG	VFNSLPAPILLDIAILSTAFSWGIGFYIVDRKAHVFSSLAIGCFVCLLGYSVASVGAPPWAVVVAPIPVDILLLWYVLRERRKMLLAYPTIWAVYIVLHVMLSSWLHYDSLIPPWKLHS*

Protein ID

Family

RBS

Sequence

Ga0102924_100010015

GGA

LPDAVSNPSPAPKPRRWSIVAAGLLLLALALVVIYTSRSAFFSPLALVVVAAIGLAALLLQLRLRKDLTTPVRAPMWLNVLGLVFAVTAVFADIIRLTPTLLQIAALGAVVCFGISGTTVLHALHKKKA*

Ga0102924_10001005

N/A

MELLLNLAWLLLALPAFWLWRGARSVPRGSKFSPVQCVLALGCMLVILFPVVSATDDLRAMRSEMEESSANKRAIRQGSQDKTSIWKCHSQPALAAAATSLIVSDRIWQPLPSLGLFAPPSPAIRHSGRSPPFSLAV*

Ga0102924_100010057

AGAAGG

MTIDERLEALTHNLELLSLETEKHDKQIGQLGTLVTEVAEGTARLLRVVEMHEHRLDSHDDRLDKLE*

Ga0102924_100010078

GAGG

VFNSLPAPILLDIAILSTAFSWGIGFYIVDRKAHVFSSLAIGCFVCLLGYSVASVGAPPWAVVVAPIPVDILLLWYVLRERRKMLLAYPTIWAVYIVLHVMLSSWLHYDSLIPPWKLHS*

NMPFamsDB