Basic Information | |
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Taxon OID | 3300007790 Open in IMG/M |
Scaffold ID | Ga0105679_10006090 Open in IMG/M |
Source Dataset Name | Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Norwegian Sequencing Centre (NSC) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 2704 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 3 (75.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Sand → Desert → Soil → Zebra Blood And Desert Soils. Microbial Community Dynamics Using Metagenomics And Cultivation |
Source Dataset Sampling Location | ||||||||
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Location Name | Etosha National Park, Namibia | |||||||
Coordinates | Lat. (o) | -19.03133 | Long. (o) | 15.54865 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F003047 | Metagenome | 510 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0105679_100060902 | F003047 | N/A | LKRGVREEVLVTDEAMIGEINTAYRRLSAAVEDLERADRELAEHVRRVRLDNAEAILEARNERTANLYVDGLLDTDEHRALEAARSRAEVGLRHARLEVDRLQLIVRLLGTRSGEGIQG* |
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