Scaffold Ga0101548_1088306

Overview

Basic Information

• Taxon OID: 3300007154
• Scaffold ID: Ga0101548_1088306
• Source Dataset Name: Marine sponge Stylissa sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - St7is
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of New South Wales
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 587
• Total Scaffold Genes: 1
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Source Dataset Sampling Location

• Location Name: Upa-Upasina, Papua New Guinea
• Coordinates
  • Lat. (^o): -0.940556
  • Long. (^o): 150.816667

Associated Families

Family	Category	Number of Sequences	3D Structure?
F069743	Metagenome / Metatranscriptome	123	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0101548_10883061	F069743	N/A	MQSHTINLSIAPSDYDALTGFLLGPFSDSLRQLSFNMSIVNDAIPEDDEDFSARLTLLPADQARLRNRVTVQPDLATVIILDDDGTIPVIDN*