Scaffold Ga0101560_1032709

Overview

Basic Information

• Taxon OID: 3300007112
• Scaffold ID: Ga0101560_1032709
• Source Dataset Name: Marine sponge Stylissa sp. microbiome, Papua New Guinea CO2seep, Dobu 'control', st5dc
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of New South Wales
• Sequencing Status: Finished

Scaffold Components

• Scaffold Length (bps): 998
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Stylissa Sp. (Marine Sponge) → Seawater And Marine Sponges Microbial Communities From Papua New Guinea Co2 Seeps

Source Dataset Sampling Location

• Location Name: Dobu 'control' site, Papua New Guinea
• Coordinates
  • Lat. (^o): -9.752083
  • Long. (^o): 150.854133

Associated Families

Family	Category	Number of Sequences	3D Structure?
F024258	Metagenome / Metatranscriptome	206	Y
F076933	Metagenome / Metatranscriptome	117	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0101560_10327091	F076933	N/A	MIYANYGAIAVITSTTYMTIVELFDVYSAPFSPEVIRPLIMTPTSILNDIILSMETER
Ga0101560_10327093	F024258	AGGAG	MCLHVNCTCAIGTRLNLDLLCAAQNGVVLELRRIAASQNCHSCQFANKQAERGYYNESNIVLCVK*