Scaffold Ga0098050_1095279

Overview

Basic Information

• Taxon OID: 3300006925
• Scaffold ID: Ga0098050_1095279
• Source Dataset Name: Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 762
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Viral Communities From The Subarctic Pacific Ocean And The Gulf Of Mexico

Source Dataset Sampling Location

• Location Name: Pacific Ocean
• Coordinates
  • Lat. (^o): -14.51
  • Long. (^o): -76.2
  • Depth (m): 9

Associated Families

Family	Category	Number of Sequences	3D Structure?
F008779	Metagenome	328	Y
F019028	Metagenome	232	Y
F030878	Metagenome	184	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0098050_10952792	F019028	N/A	MKKFNVRDRVFLDEAINAFLRESKKFEEESELLGNRPIITYEYWKMMAKEVQEKLETFSTQKANRQSIRYNEEINNI*
Ga0098050_10952793	F008779	N/A	MKDGIYYTKANGGTTYFVLNEKVLMKLMGGMYKTTEHFVFGDWKQELEPGMVEQFDEVYNKVKQW*
Ga0098050_10952794	F030878	N/A	AYELVRVLKENQLKNPDTSLLKKWFKCDTLLRNQGKFYFCRLIEDIEYEEITN*