Scaffold Ga0098054

Basic Information
Taxon OID	3300006789 Open in IMG/M
Scaffold ID	Ga0098054_1014980 Open in IMG/M
Source Dataset Name	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Permanent Draft

Basic Information

Taxon OID

3300006789 Open in IMG/M

Scaffold ID

Ga0098054_1014980 Open in IMG/M

Source Dataset Name

Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG

Source Dataset Category

Metagenome

Source Dataset Use Policy

Open

Sequencing Center

DOE Joint Genome Institute (JGI)

Sequencing Status

Permanent Draft

Scaffold Components
Scaffold Length (bps)	3148
Total Scaffold Genes	6 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (33.33%)
Novel Protein Genes	5 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (20.00%)
Associated Families	5

Scaffold Components

Scaffold Length (bps)

3148

Total Scaffold Genes

6 (view)

Total Scaffold Genes with Ribosome Binding Sites (RBS)

2 (33.33%)

Novel Protein Genes

5 (view)

Novel Protein Genes with Ribosome Binding Sites (RBS)

1 (20.00%)

Associated Families

Taxonomy
All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon	(Source: UniRef50)

Taxonomy

All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon

(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Viral Communities From The Subarctic Pacific Ocean And The Gulf Of Mexico

Source Dataset Ecosystem

Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Viral Communities From The Subarctic Pacific Ocean And The Gulf Of Mexico

Source Dataset Sampling Location
Location Name	Pacific Ocean
Coordinates	Lat. (^o)	-14.51	Long. (^o)	-76.2	Alt. (m)	Depth (m)	45
Location on Map

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Source Dataset Sampling Location

Location Name

Pacific Ocean

Coordinates

Lat. (^o)

-14.51

Long. (^o)

-76.2

Alt. (m)

Depth (m)

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F006892	Metagenome	362	Y
F058519	Metagenome	135	N
F059875	Metagenome	133	Y
F073760	Metagenome	120	N
F092873	Metagenome	107	N

Family

Sequences

Protein ID	Family	RBS	Sequence
Ga0098054_10149802	F006892	GGAGG	MSDTGIIIPLRERIRDLEVINEAHKKKNGQLRQEIQDKDKIIKELIEKINNPTKKMREQGEI*
Ga0098054_10149803	F058519	N/A	MANHLKIIGEAYQKFNDTNTSVSANKEPHSLRAFKRYKLNSEQRNKCTNASLTLGTLGHDISEKAIVKNLSVEECIADKEIQEKIKSYVTVDMKDQMKFEFGIKFLKDICQNHIENIKELPKQKWQTEIEHIKWIDPINVPFRMFIDLTGDTHINDLKNKFPTVKYAPLKTKQTKENPNRIGDWTCSHPKIDQRAYTGDLMQIALYSHTTGLKPSLSYASATDRILFTEKNCEELQPENLKRNLQELIAYEIAWEKKLKAANGSVDELLWLNIPDFSEIRKGSFWWNSIPQEYMEDYLKTYV*
Ga0098054_10149804	F092873	N/A	MNNSLNKKLIEISIKSGYKTEVVESYMARNNLLPKDFKFRRSALDLLLKDCNKKISDFVKDTYQDKEHKNKLAQISKILNPKPNAPKYFTENDLANDLAHWFNSFCNTSEVIAPNFFVGETIQISVIGSLYGNGQIGLNKGKDLYKINIHPKYGNCQAIESKIGSTRGLMRLFIPKKTIERNADNRFSIAQDKKSKIIWFGYLEPQSNGRYNILDKSYSTGKTIGTLVENIHLSWSAEIKAAYYPTIYNS*
Ga0098054_10149805	F059875	N/A	MKVLVLIFGVITNDGQIDLVKVPNSELKNINSCEKAIEINTKWVDNPDFDNNPLPWGFYTYKNRVIMLQYCTENGVYSG*
Ga0098054_10149806	F073760	N/A	MGFIVDNTINLDLYEMQSAAHLGILRCLESKKHKESWGYNYKGSLNDQMAKSISGAMGEVAASKFLGIKFEYHCNVGGVPDLIFKDLKLQVRTQIPKNNNSLIIRPK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0098054_1014980

Overview

Ecosystem & Geography

Associated Families

Sequences