Scaffold Ga0101569_10693714

Overview

Basic Information

• Taxon OID: 3300006625
• Scaffold ID: Ga0101569_10693714
• Source Dataset Name: Soil microbial communities from the Leymus chinensis steppe, China - after adding 10.5 g N m- 2, yr-1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chengdu Institute of Biology, Chinese Academy of Sciences
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 561
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil Microbial Communities From The Leymus Chinensis Steppe, China - Nitrogen Deposition

Source Dataset Sampling Location

• Location Name: the Inner Mongolia Grassland Ecosystem Research Station
• Coordinates
  • Lat. (^o): 43.63
  • Long. (^o): 116.7
  • Depth (m): .1

Associated Families

Family	Category	Number of Sequences	3D Structure?
F061196	Metagenome	132	Y
F073919	Metagenome / Metatranscriptome	120	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0101569_106937141	F073919	AGGAGG	MAKKIREFMTHREPPEHIWMERDENAVIGTARMGQRMVPRIRPFDLLRSTPLSGNRARAMVFEGD
Ga0101569_106937142	F061196	N/A	RALAKGREFARRYKEPTIAMVSKYTPFPPEALSIDYDSALSSMTDEGSVADDVLKDEILTRAELIKATNIPDPGKFYDYSIIKKIYPELKKSWKPKL*