Scaffold Ga0099364_10201358

Overview

Basic Information

• Taxon OID: 3300006226
• Scaffold ID: Ga0099364_10201358
• Source Dataset Name: Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2217
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (28.57%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany

Source Dataset Sampling Location

• Location Name: Pointe-Noire, Republic of the Congo
• Coordinates
  • Lat. (^o): -4.7
  • Long. (^o): 11.83

Associated Families

Family	Category	Number of Sequences	3D Structure?
F010846	Metagenome	298	Y
F032322	Metagenome	180	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0099364_102013584	F032322	GAGG	VISVVVLQNRMDLLKGELGSSNKTCVTSAVDGNTVANIEDERVSSVTEEDDQEPTTILAMKTELNENCVSVVSVTQISYGLYPELPSPTSVCPCETKI*
Ga0099364_102013586	F010846	AGAAGG	VICVVVLQNCMGFVEGETGSCNETGVECDVDGTEDVGIEAEEAIDIKEEVSIKVEEAIDIKEEFPEAISFPPIKTEQEVRLWGGVFV*