Scaffold Ga0099364_10042809

Overview

Basic Information

• Taxon OID: 3300006226
• Scaffold ID: Ga0099364_10042809
• Source Dataset Name: Microcerotermes parvus P3 segment gut microbial communities from Pointe-Noire, Republic of the Congo - Th196 P3
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5323
• Total Scaffold Genes: 14
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 5 (35.71%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amniota → Sauropsida → Sauria → Archelosauria → Archosauria → Dinosauria → Saurischia → Theropoda → Coelurosauria → Aves → Neognathae → Galloanserae → Galliformes (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut → Cubitermes And Nasutitermes Termite Gut Microbial Communities From Max Planck Institute For Terrestrial Microbiology, Germany

Source Dataset Sampling Location

• Location Name: Pointe-Noire, Republic of the Congo
• Coordinates
  • Lat. (^o): -4.7
  • Long. (^o): 11.83

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000672	Metagenome	944	Y
F068986	Metagenome	124	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0099364_1004280914	F000672	N/A	TWFEGLAADFYDSGTQKLVPRLNKCLDNAGDYVQK*
Ga0099364_100428097	F068986	N/A	MGELSSLHTRAAPKVMPPILLCWPMTLEANVVDMAVEVEPSRQYSVKFCCRATDDSRGAV