Scaffold Ga0081594_1130672

Overview

Basic Information

• Taxon OID: 3300006077
• Scaffold ID: Ga0081594_1130672
• Source Dataset Name: Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid B
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Max Planck Institute for Plant Breeding Research
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1101
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluid → Microbial Communities In Diffuse Hydrothermal Fluids Of Manus Basin, Bismarck Sea

Source Dataset Sampling Location

• Location Name: Manus Basin, Bismarck Sea
• Coordinates
  • Lat. (^o): -3.7992608
  • Long. (^o): 152.1013353

Associated Families

Family	Category	Number of Sequences	3D Structure?
F024883	Metagenome	204	Y
F024888	Metagenome	204	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0081594_11306721	F024883	GAG	MKLKKRKKKNVWEEVSETIEAFRNNPDYAPDPEHVQIYITTKDGGIVELHIGYDGEKILKTFDSFDSEEELEEQRIIDRMEDPEGGILLN*
Ga0081594_11306723	F024888	GGA	MNLDKIDLKNIHKIVGKIVDGIQKKEMKGKTPDEFAQERGFDNWMEYAAWSRHTGGDYHMMEMMLKSKWKEQDPEEFARQKKIEGDQRTREHSYIGILDEEKIKKKNNGHKYYKPVHKSEFSAEELEVIYDERGVGGEPVEYRW*