Scaffold Ga0081592_1060731

Overview

Basic Information

• Taxon OID: 3300006076
• Scaffold ID: Ga0081592_1060731
• Source Dataset Name: Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Max Planck Institute for Plant Breeding Research
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1666
• Total Scaffold Genes: 7
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 5 (71.43%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids → Microbial Communities In Diffuse Hydrothermal Fluids Of Manus Basin, Bismarck Sea

Source Dataset Sampling Location

• Location Name: Manus Basin, Bismarck Sea
• Coordinates
  • Lat. (^o): -3.7999163
  • Long. (^o): 152.1008595

Associated Families

Family	Category	Number of Sequences	3D Structure?
F009892	Metagenome / Metatranscriptome	311	Y
F017492	Metagenome / Metatranscriptome	240	Y
F052654	Metagenome / Metatranscriptome	142	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0081592_10607311	F009892	N/A	RNGFLILLEQNNITLDESRMAEVNYYFNLWGETLRQDNKMGKAHDFDAYITWMKKQ*
Ga0081592_10607314	F052654	GAG	MSVPTRLERCQDAVVWWWPEFKTEDSIPLVIRDNVREKITNEDWEDAYEIMAEYLA*
Ga0081592_10607317	F017492	GGAG	MLVAHEIKKIFQSERDRLRNADHPDMMRPKNNRRPLKGVARKLYLDGLAKLNKAEALANSGLGLSRIKVPVEKEKDDEGMKK*