Basic Information | |
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Taxon OID | 3300005936 Open in IMG/M |
Scaffold ID | Ga0075124_10010700 Open in IMG/M |
Source Dataset Name | Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKS |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 4039 |
Total Scaffold Genes | 11 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 5 (45.45%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → unclassified Ignavibacteriales → Ignavibacteriales bacterium | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Lake Water → Saline Lake Microbial Communities From Various Lakes In Antarctica |
Source Dataset Sampling Location | ||||||||
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Location Name | Antarctica: Ace Lake | |||||||
Coordinates | Lat. (o) | -68.4725 | Long. (o) | 78.188 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F067647 | Metagenome | 125 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0075124_100107009 | F067647 | GGAGG | MAYLYDPPADVNTATQMISWINGTTSQWLFQGIIGSVFVISLISMLQNQSNTASKCFSSASFIAMIISVLARVLDLVPTWFMSIWIVMVGLSAVWMYVEGTQ* |
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