Scaffold Ga0079957_1065321

Overview

Basic Information

• Taxon OID: 3300005805
• Scaffold ID: Ga0079957_1065321
• Source Dataset Name: Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Oregon State University
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2131
• Total Scaffold Genes: 9
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 6 (66.67%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake → Microbial And Algae Communities From Cheney Reservoir In Wichita, Kansas, Usa

Source Dataset Sampling Location

• Location Name: Wichita, Kansas, USA
• Coordinates
  • Lat. (^o): 37.7330997
  • Long. (^o): -97.7990663

Associated Families

Family	Category	Number of Sequences	3D Structure?
F013082	Metagenome	274	Y
F019968	Metagenome / Metatranscriptome	226	Y
F086632	Metagenome / Metatranscriptome	110	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0079957_10653213	F013082	AGGA	MSLTKTVQQEIDRLYLASKLNSHIVANEAPYYYDLCSIEDKTITLDKFYELFPYHNPDINSEYWKQQHNKWKEIWKQDVV*
Ga0079957_10653217	F086632	N/A	MKKSVDIDILEGIFEILKKYFIVQEFTSVYKITRKEKEIYNAVAKLVEGKNNVKQR*
Ga0079957_10653219	F019968	N/A	MRNTGGICSMSYYEMKLMTAVLSRILLDNEIRGEHTKKRIYTLINKLNNMMSKQC*