Basic Information | |
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Taxon OID | 3300005805 Open in IMG/M |
Scaffold ID | Ga0079957_1000754 Open in IMG/M |
Source Dataset Name | Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Oregon State University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 29500 |
Total Scaffold Genes | 33 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 21 (63.64%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 2 (100.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake → Microbial And Algae Communities From Cheney Reservoir In Wichita, Kansas, Usa |
Source Dataset Sampling Location | ||||||||
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Location Name | Wichita, Kansas, USA | |||||||
Coordinates | Lat. (o) | 37.7330997 | Long. (o) | -97.7990663 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F011759 | Metagenome / Metatranscriptome | 287 | Y |
F076076 | Metagenome / Metatranscriptome | 118 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0079957_100075427 | F011759 | GGAG | MKDDLIADLWHVVVEHIPEKHRQDVASDFINTLLDHGIKESVLQELIGVDPHLDEAIEYSIDGDEIENDYEDEEE* |
Ga0079957_100075432 | F076076 | AGGAG | MADLYGTSASINTRKILGDGASGVGPYTSFGTPKLQALKIISATVNFSTTPAAENSNLYKAVSALQDLAEVYYVGVPGNTATGFVALVHLNKTDTGTGFGASSSADGSYENIEDEIRAAVGTAENDVTVTNITLTGLTFA* |
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