Basic Information | |
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Taxon OID | 3300005738 Open in IMG/M |
Scaffold ID | Ga0076926_115965 Open in IMG/M |
Source Dataset Name | Seawater microbial communities from Vineyard Sound, MA, USA - sterilised with crude oil T0 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Wisconsin, Madison |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 514 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine → Microbial Degradation Of Oil |
Source Dataset Sampling Location | ||||||||
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Location Name | USA | |||||||
Coordinates | Lat. (o) | 41.4417 | Long. (o) | -70.7744 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F026238 | Metagenome | 198 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0076926_1159651 | F026238 | GAGG | MQQQQYKVNSKIFDSIESAGEYMLTLKHKATMEVYTPPSAASVKLSVVRNMLIREMLEWAGSFVHSMAPSTDVDWMYSFEDDEGCGDAGDCYYEDGTNVTFGSNLMWEDAKHDYQSAVDNFDSLLGDYNKYDTVEKLSEMLNSMYHTMSDHSSETD |
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