Scaffold Ga0070723_10182274

Overview

Basic Information

• Taxon OID: 3300005612
• Scaffold ID: Ga0070723_10182274
• Source Dataset Name: Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 948
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment → Marine Sediment Microbial Communities From The Atlantic Coast Under Amendment With Organic Carbon And Nitrate

Source Dataset Sampling Location

• Location Name: Atlantic Coast
• Coordinates

Associated Families

Family	Category	Number of Sequences	3D Structure?
F049642	Metagenome / Metatranscriptome	146	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0070723_101822742	F049642	N/A	MKVIVVISGFTQKNHQDTGSKRLWRELHMLDDLCKSEDTIIDLREWDTDWKSYSKYINSLEPSEVLICCYSWGGGHGMPQLSKRLECPVSVVACDPVYHSPTKLGCWMALFDRKIKLAKNVSVVGWLSQRGDRLDGDKLVGGKSICRERTYDYTHTDIDNSPEYHKAAVIAAKTYLQK*