Basic Information | |
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Taxon OID | 3300005505 Open in IMG/M |
Scaffold ID | Ga0068898_10991520 Open in IMG/M |
Source Dataset Name | Soil microbial communities from Colorado Plateau and Sonoran desert - Soil Crust after wet up 5A (Metagenome Metatranscriptome) |
Source Dataset Category | Metatranscriptome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 733 |
Total Scaffold Genes | 1 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Pseudanabaenaceae → Pseudanabaena → unclassified Pseudanabaena → Pseudanabaena sp. PCC 6802 | (Source: IMG/M) |
Source Dataset Ecosystem |
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Environmental → Terrestrial → Soil → Sand → Desert → Soil → Soil Microbial Communities From Four Geographically Distinct Crusts In The Colorado Plateau And Sonoran Desert |
Source Dataset Sampling Location | ||||||||
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Location Name | Colorado Plateau and Sonoran desert | |||||||
Coordinates | Lat. (o) | 38.42 | Long. (o) | -109.4099 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F083733 | Metagenome / Metatranscriptome | 112 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0068898_109915201 | F083733 | N/A | LLAKTKVVKHLIQDISGVEIQEMTSSDSNTYRVCLVLESGKRRVPLTSCFSTGLGNKHKKAEIIATFLEIGNYGLGGFPSQETSSEELQWKTVEEEVLHWKTAIKSDPNDADAHLKLALALISQDKTKNKEQVMGYLKQAEDLFKSQGYDEEAMQVGQLYGLAYWGMLGK* |
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