Scaffold Ga0065725_10003696

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0065725_10003696

Scaffold Ga0065725_10003696

Overview

Basic Information
Taxon OID	3300005283 Open in IMG/M
Scaffold ID	Ga0065725_10003696 Open in IMG/M
Source Dataset Name	Nasutitermes corniger P1 gut segment microbial communitites from University of Florida, USA - Alkaline Insect Gut Metagenome: eDNA_1
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	988
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Novel Protein Genes	2 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	2

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Arthropoda → Digestive System → Hindgut → P1 Segment → Nasutitermes Corniger Hindgut → Nasutitermes Corniger Hindgut Microbial Communities From The University Of Florida, Usa

Source Dataset Sampling Location
Location Name	Florida, USA
Coordinates	Lat. (^o)	26.135833	Long. (^o)	-80.129444	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000019	Metagenome	6343	Y
F019409	Metagenome	230	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0065725_100036961	F000019	N/A	MQRYTVYLYLETALHVSGGTSTHHQERIQLYLQHLVFVTPLLLSAAIVEELEPV*
Ga0065725_100036962	F019409	N/A	VFYTHIFLWISEGTAIISLYSINPLNAELNPICHSLILLGDLTFMGPCIVSIFQYISNKMQRYTVYLYLETALHVSGGTSTHHQERIQLYLQHLVFVTPLLLSAAIVEELEPV*

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