Scaffold Ga0065725_10001060

Overview

Basic Information

• Taxon OID: 3300005283
• Scaffold ID: Ga0065725_10001060
• Source Dataset Name: Nasutitermes corniger P1 gut segment microbial communitites from University of Florida, USA - Alkaline Insect Gut Metagenome: eDNA_1
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: DOE Joint Genome Institute (JGI)
• Sequencing Status: Draft

Scaffold Components

• Scaffold Length (bps): 1571
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (20.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 2

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Arthropoda → Digestive System → Hindgut → P1 Segment → Nasutitermes Corniger Hindgut → Nasutitermes Corniger Hindgut Microbial Communities From The University Of Florida, Usa

Source Dataset Sampling Location

• Location Name: Florida, USA
• Coordinates
  • Lat. (^o): 26.135833
  • Long. (^o): -80.129444

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000104	Metagenome	2242	Y
F020622	Metagenome	223	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0065725_100010601	F000104	N/A	MRRXAGYIWTDYKTNAQIAKELKITQILDKLLEYKRNWIQHVNRMPRNRLPRVMKRYSPTGRRNHGRPLKRLLDT*
Ga0065725_100010604	F020622	N/A	MAETNLDAIRKQKNAEYSKRYRLKRKMKMQQQAPTTSEAEPEKLQV*