Scaffold Ga0072941_1043364

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0072941_1043364

Scaffold Ga0072941_1043364

Overview

Basic Information
Taxon OID	3300005201 Open in IMG/M
Scaffold ID	Ga0072941_1043364 Open in IMG/M
Source Dataset Name	Microcerotermes gut microbial communities from Indooroopilly, Australia - IN01 metagenome
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Queensland
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	2658
Total Scaffold Genes	6 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (33.33%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
Not Available	(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut → Termite Gut Microbial Communities From Australia

Source Dataset Sampling Location
Location Name	Indooroopilly, Australia
Coordinates	Lat. (^o)	-27.5	Long. (^o)	152.9	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F023706	Metagenome	209	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0072941_10433641	F023706	N/A	DKPDGTTHHAQVAKTCLPAGERPNKTPVLISGFGDARSFLAWLWASCNGGLMAQIKGEKLVVVPSTAHGFTASVIALRFLNGKEGVSFHILTLPEDRRVRLLVKNLGRDMPESVVRDKLESLNI*

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