Scaffold Ga0073159_1000177

Overview

Basic Information

• Taxon OID: 3300005192
• Scaffold ID: Ga0073159_1000177
• Source Dataset Name: E5 T9
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Alicante
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 4068
• Total Scaffold Genes: 12
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 9 (75.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (100.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Unclassified → Hypersaline → Mallorca 2014 E5

Source Dataset Sampling Location

• Location Name: Salinas de Campos (Mallorca)
• Coordinates
  • Lat. (^o): 39.338015
  • Long. (^o): 3.051796

Associated Families

Family	Category	Number of Sequences	3D Structure?
F075754	Metagenome	118	N
F086685	Metagenome	110	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0073159_10001771	F086685	GAG	MIELTSIPLVVWAIACATFVIVGHELTHYIAWLPVATSIEYHFQEQYIEAEYPDTAFARKWAAVAGISPIIVATGLVLALIASGWNPTATWHHITGSAAVVLYGISGGKSDFVALFNLVRTPESPAAE*
Ga0073159_10001772	F075754	AGGAG	MRYQTALRWHTPMNPWEPIHVRVDDSTEWYRTQVERGDYLRDSDHDAEMSHREHGLVAEAIVKAVFPGFEWWDTESFDLFRGQTRYDIISRNINRGEPRQHYLHHIRAKKEERAKPSTNYYAVVRNHPDYWLIGHINSVRFWYLCDRDKPEFWDGREAEGGHLTYEHFKQLPIPDPITPPPAIQVFGQG*