Basic Information | |
---|---|
Taxon OID | 3300005170 Open in IMG/M |
Scaffold ID | Ga0071327_1023451 Open in IMG/M |
Source Dataset Name | Worm MetaG Olavius vacuus BAHAMAS.1 (version 1) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Permanent Draft |
Scaffold Components | |
---|---|
Scaffold Length (bps) | 4086 |
Total Scaffold Genes | 8 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (12.50%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
---|---|
All Organisms → cellular organisms → Eukaryota → Opisthokonta | (Source: UniRef50) |
Source Dataset Ecosystem |
---|
Host-Associated → Annelida → Digestive System → Unclassified → Unclassified → Marine Gutless Worms Symbiont → Marine Gutless Worms Symbiont Microbial Communities From Various Locations |
Source Dataset Sampling Location | ||||||||
---|---|---|---|---|---|---|---|---|
Location Name | Germany: Marburg | |||||||
Coordinates | Lat. (o) | 50.8 | Long. (o) | 8.81 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
---|---|---|---|
F029606 | Metagenome | 187 | Y |
Protein ID | Family | RBS | Sequence |
---|---|---|---|
Ga0071327_10234518 | F029606 | N/A | MLSYRRETALQGALQFSPKVEDWNWETIVYGHYKSIFNHCDIIGLKTVEFREKKRKIRTITAFKVIQGHRGRYQSKARMRFPISD* |
⦗Top⦘ |