Basic Information | |
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Taxon OID | 3300005078 Open in IMG/M |
Scaffold ID | Ga0070770_10210861 Open in IMG/M |
Source Dataset Name | Microbial Community from Halfdan Field MHBA5 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Shell Corporation |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 828 |
Total Scaffold Genes | 2 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 2 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 2 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Water → Subsurface Hydrocarbon Microbial Communities From Various Worldwide Shell Locations |
Source Dataset Sampling Location | ||||||||
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Location Name | North Sea, Denmark | |||||||
Coordinates | Lat. (o) | 55.49 | Long. (o) | 7.42 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F007721 | Metagenome / Metatranscriptome | 346 | N |
F084260 | Metagenome / Metatranscriptome | 112 | N |
Protein ID | Family | RBS | Sequence |
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Ga0070770_102108611 | F007721 | N/A | MKPIRSNELEFFKELIKDKFYDKQEQIQSEIHFEADKLSEKKKSTFAKECGVDKDIKQLDKVNQQYLDFIRTKSVVEQKLLDKVNQMANVISNRLERLAKARQWDSSFSSFNAKEDGVEYFTNKLDEVCYQEAKEHIKKGHKLYHALKEKRDNCKVIVHTGGDINSTVKTLQKEMASADIKLAIPDQLLQIAVK* |
Ga0070770_102108612 | F084260 | N/A | MELFFIIGLLAIVGFGLWSMRETNKFVDEQNRQIRLQRAFDRVDKIVKQKQMEFKFDK* |
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