Basic Information | |
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Taxon OID | 3300005074 Open in IMG/M |
Scaffold ID | Ga0070431_1149838 Open in IMG/M |
Source Dataset Name | Marine benthic sponge Stylissa massa associated microbial communities from Guam, USA |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | University of Utah |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 880 |
Total Scaffold Genes | 3 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Novel Protein Genes | 3 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 3 |
Taxonomy | |
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Not Available | (Source: ) |
Source Dataset Ecosystem |
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Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Marine Benthic Sponge Stylissa Massa Associated → Stylissa Massa Endosymbiont Microbial Communities From Guam |
Source Dataset Sampling Location | ||||||||
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Location Name | Guam | |||||||
Coordinates | Lat. (o) | 13.4388546 | Long. (o) | 144.8224773 | Alt. (m) | Depth (m) | Location on Map | |
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Family | Category | Number of Sequences | 3D Structure? |
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F012584 | Metagenome | 279 | Y |
F016820 | Metagenome | 244 | Y |
F099447 | Metagenome | 103 | N |
Protein ID | Family | RBS | Sequence |
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Ga0070431_11498381 | F099447 | N/A | ADKIINHCFSDLIKWTYDDAVFQLTEIFSFTDHECEQLLKEYDILSDTTEEVIMNPAPNFNATAPRDVKDLAENLWQARKYISTAKKLISATALTPDDYDNRESFQEAVVQRANVNFHFISITKYIDEMTEYTKGYVPPLKR* |
Ga0070431_11498382 | F012584 | N/A | MKLKPKLPENTFELNEDSLPTSADADPWGKIMVWRKDVGWSIIQHSEAIQFVAMKHTHWTFTPDAPHD* |
Ga0070431_11498383 | F016820 | N/A | MTKKEFLYIVFSSCGESVQEIHGVYKDLKGASYGAISALSTLFPKHGDEAKIIRCEIISTEEAELEYDKTKPKELFDKCEDDFCP |
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