Scaffold Ga0070431_1098276

Overview

Basic Information

• Taxon OID: 3300005074
• Scaffold ID: Ga0070431_1098276
• Source Dataset Name: Marine benthic sponge Stylissa massa associated microbial communities from Guam, USA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Utah
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1260
• Total Scaffold Genes: 4
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 3 (75.00%)
• Novel Protein Genes: 3
• Novel Protein Genes with Ribosome Binding Sites (RBS): 2 (66.67%)
• Associated Families: 3

Taxonomy: Not Available (Source: )

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Marine Benthic Sponge Stylissa Massa Associated → Stylissa Massa Endosymbiont Microbial Communities From Guam

Source Dataset Sampling Location

• Location Name: Guam
• Coordinates
  • Lat. (^o): 13.4388546
  • Long. (^o): 144.8224773

Associated Families

Family	Category	Number of Sequences	3D Structure?
F012041	Metagenome	284	Y
F027507	Metagenome	194	Y
F070207	Metagenome	123	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0070431_10982761	F027507	AGGA	MDKYEKQKIMIEQLPNDFKMSDKQTLTLIRDLFEMIKDENKIIHLLDDRIKLLELKLKN*
Ga0070431_10982762	F012041	AGGA	MKKYRVSLQVDKEWVKNFDLTFDAEDEQDAESQAMMEVKMNLGDYITAYADEEEN*
Ga0070431_10982763	F070207	N/A	MKKRIKHNDLLPWFTDDHGTLPASYLRSCERFFKSLKPQATSSKRQASSNKRLTFTG*