Scaffold Ga0070431_1048361

Overview

Basic Information

• Taxon OID: 3300005074
• Scaffold ID: Ga0070431_1048361
• Source Dataset Name: Marine benthic sponge Stylissa massa associated microbial communities from Guam, USA
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: University of Utah
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 2179
• Total Scaffold Genes: 8
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 5 (62.50%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → cellular organisms → Bacteria (Source: IMG/M)

Ecosystem & Geography

Source Dataset Ecosystem: Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Marine Benthic Sponge Stylissa Massa Associated → Stylissa Massa Endosymbiont Microbial Communities From Guam

Source Dataset Sampling Location

• Location Name: Guam
• Coordinates
  • Lat. (^o): 13.4388546
  • Long. (^o): 144.8224773

Associated Families

Family	Category	Number of Sequences	3D Structure?
F026151	Metagenome	199	Y
F050675	Metagenome	145	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0070431_10483611	F050675	N/A	KDVEIIGDALWLNYKGYDIRIEKTKQFNNNNLVITVTPKGKEDYTDRLEVKE*
Ga0070431_10483612	F026151	AGAAG	MKKNLPTQDSVKRLMEQTLKNILSCVGGVYYTKYKLKLERKKKNEKRTLGS*