Scaffold Ga0071347_1004154

Overview

Basic Information

• Taxon OID: 3300005073
• Scaffold ID: Ga0071347_1004154
• Source Dataset Name: Cellulose enrichment metagenome from thermal spring in Terrace, British Columbia, Canada
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Leibniz Institute
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 5013
• Total Scaffold Genes: 5
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 2 (40.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Alkaline → Sediment → Cellulose Enrichment Metagenome From Thermal Spring In Terrace, British Columbia, Canada

Source Dataset Sampling Location

• Location Name: Terrace, B.C. Canada
• Coordinates
  • Lat. (^o): 54.358506
  • Long. (^o): -128.541159

Associated Families

Family	Category	Number of Sequences	3D Structure?
F029929	Metagenome	187	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0071347_10041542	F029929	N/A	LPIFQQSVDFELYEWLLKEQKRGKAGTVQDVIRQVLREAKVDAGSIKKRGR*