Scaffold Ga0068513_1014262

Overview

Basic Information

• Taxon OID: 3300004951
• Scaffold ID: Ga0068513_1014262
• Source Dataset Name: Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 844
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 1
• Novel Protein Genes with Ribosome Binding Sites (RBS): 0 (0.00%)
• Associated Families: 1

Taxonomy: All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles

Source Dataset Sampling Location

• Location Name: East Sea, Korea
• Coordinates
  • Lat. (^o): 37.0
  • Long. (^o): 131.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F002426	Metagenome	560	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0068513_10142621	F002426	N/A	SKHLGENMAGLQTRTYTLAGESLTAGTFANISQLLGSTQSTTNPEGMTKVVRISLSCSPDHTSTTDGVSVFKFAGDGVSVQQIFAGPAWSNQAAGPLDGNNGMPVVMESASGLFDIIPGNQIDFSVSCTTAETVDVAVSITYAP*