Scaffold Ga0068513_1009105

Overview

Basic Information

• Taxon OID: 3300004951
• Scaffold ID: Ga0068513_1009105
• Source Dataset Name: Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1045
• Total Scaffold Genes: 3
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (33.33%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → unclassified viruses → Circular genetic element sp. (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles

Source Dataset Sampling Location

• Location Name: East Sea, Korea
• Coordinates
  • Lat. (^o): 37.0
  • Long. (^o): 131.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F014012	Metagenome	266	Y
F086342	Metagenome	111	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0068513_10091051	F086342	AGTAG	MFMAYNMKDVFYLDTSILTTTSAGDGIQNIDLSSYVDPIARGRAKGTGLAIYKVFFDFSNSSDNGPVPAGSTGALRVGLISSPGLPSAAVGGASIAAGTLVAGNDLMIAGADFTAGGTAAGDPAPYMFLKPSKEVPYIVVRDQVSLMVDVKTAMSTNVLISVRLECAQ
Ga0068513_10091052	F014012	N/A	MAKEKFTFGSTSVMREVPPGKHAVISFTGKMSAVDTEWGEKCSFNITLYSHPSYESISDNGIETIWQSKSQCAEQLLRAASEGMPDLTKALKEKWKLIRTEEGTYFIEQI*