Scaffold Ga0068513_1007649

Overview

Basic Information

• Taxon OID: 3300004951
• Scaffold ID: Ga0068513_1007649
• Source Dataset Name: Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-EVs
• Source Dataset Category: Metagenome
• Source Dataset Use Policy: Open
• Sequencing Center: Chunlab, Inc
• Sequencing Status: Permanent Draft

Scaffold Components

• Scaffold Length (bps): 1136
• Total Scaffold Genes: 2
• Total Scaffold Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Novel Protein Genes: 2
• Novel Protein Genes with Ribosome Binding Sites (RBS): 1 (50.00%)
• Associated Families: 2

Taxonomy: All Organisms → Viruses → unclassified viruses → Circular genetic element sp. (Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water → Marine And Wastewater Microbial Communities From Korea, With Extracellular Vesicles

Source Dataset Sampling Location

• Location Name: East Sea, Korea
• Coordinates
  • Lat. (^o): 37.0
  • Long. (^o): 131.0

Associated Families

Family	Category	Number of Sequences	3D Structure?
F020469	Metagenome	224	Y
F038853	Metagenome	165	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0068513_10076491	F038853	GAG	MKKSNEFHFGATSVMREVPPGQTAVIKFNGKLEEIETEWGNKMKYPILLFSHPSYESISKEGIETVWQSNSQASRDLAAALQQGIKELSVAFHENKWKLTRTEEGTYFLDVIL*
Ga0068513_10076492	F020469	N/A	TFSLMLYFAAWTIFYALLSKYIARLSKDEWVTWAKSRESDDELIEILEGVIDEIEDRIHTKLEQFQASFFGSIGAASKKIDDATGQTTIKAITRENPIMGFVADMLMKRQGVGNLLDAVKGAEQGSEQPKTPRKLGL*